Edit default values

There is a way to edit the default values of disable certain fields in the smartscope session setup page to suit your facility.

In the SmartScope installation folder, open the shared/smartscope/default_collection_params.yaml as shown below:

Version 0.10Version <0.10

You may now customize the form per detector and per mode: collection or screening. The detector id is the first key. In the examples below, the id of the detector is '4' To find the detector id, navigate to the admin portal to your detector entry and the id will be displayed in the url of the page.

'4':
  screening:
    atlas_x : 
      initial: 5
    atlas_y :
      initial: 3
    square_x :
      initial: 1
      readonly: True
    square_y :
      initial: 1
      readonly: True
    squares_num :
      initial: 3
    holes_per_square :
      initial: 2
    bis_max_distance :
      initial: 3
    min_bis_group_size :
      initial: 1
    target_defocus_min :
      initial: -2
    target_defocus_max :
      initial: -2
    step_defocus :
      initial: 0
    drift_crit :
      initial: -1
    tilt_angle :
      initial: 0
    save_frames :
      initial: True
    force_process_from_average :
      initial: False
      disabled: True
      hidden: True
    offset_targeting :
      initial: False
    offset_distance :
      initial: -1
    zeroloss_delay :
      initial: -1
    hardwaredark_delay :
      initial: -1
      hidden: True
    coldfegflash_delay :
      initial: -1
      hidden: True
    afis:
      initial: False
      hidden: True
  collection:
    atlas_x : 
      initial: 5
    atlas_y :
      initial: 5
    square_x :
      initial: 1
      readonly: True
    square_y :
      initial: 1
      readonly: True
    squares_num :
      initial: 3
    holes_per_square :
      initial: 0
    bis_max_distance :
      initial: 4
    min_bis_group_size :
      initial: 3
    target_defocus_min :
      initial: -1
    target_defocus_max :
      initial: -2
    step_defocus :
      initial: 0.2
    drift_crit :
      initial: -1
    tilt_angle :
      initial: 0
    save_frames :
      initial: True
    force_process_from_average :
      initial: False
      disabled: True
      show: False
    offset_targeting :
      initial: False
    offset_distance :
      initial: -1
    zeroloss_delay :
      initial: -1
      hidden: True

atlas_x : 
  initial: 6
atlas_y :
  initial: 2
square_x :
  initial: 1
  readonly: True
square_y :
  initial: 1
  readonly: True
squares_num :
  initial: 3
holes_per_square :
  initial: 2
bis_max_distance :
  initial: 3
min_bis_group_size :
  initial: 1
target_defocus_min :
  initial: -2
target_defocus_max :
  initial: -2
step_defocus :
  initial: 0
drift_crit :
  initial: -1
tilt_angle :
  initial: 0
save_frames :
  initial: True
force_process_from_average :
  initial: False
  disabled: True
offset_targeting :
  initial: True
offset_distance :
  initial: -1
zeroloss_delay :
  initial: -1

Changing default values

There is one entry for each field in the form. The initial key is the default value displayed in the form.

Simply change the value and the changes will be automatically reflected on the webpage.

Disabling a field

To completely disable a field and always make it use the default value, simply add the disabled: True key for the field.