SmartScope Documentation
  • SmartScope Home
  • Latest News
  • Beta Program
  • Installation
    • Minimal requirements
    • Installation with Docker or Podman
      • How to prepare your docker-compose file
      • Complete list of environment variables
    • Installation with Anaconda/Miniconda
    • Additionnal information on installation
      • Complete list of environment variables
  • Updating SmartScope
    • Updating a podman installation
  • Setup
    • Admin portal
    • SerialEM setup
  • Web Interface
    • Log in
    • Navigation
  • Running SmartScope
    • How to prepare SerialEM
    • Set up SmartScope
    • Session page
  • Testing and Troubleshooting
    • Testing SmartScope without the microscope
  • How to Cite
  • Contact Us
  • License

Versions

  • 0.8
  • v0.7

Branches

  • dev
  • stable
Theme by the Executable Book Project
  • repository
  • open issue
  • .rst

Additionnal information on installation

Additionnal information on installation

  • Complete list of environment variables
    • General
    • Fake-scope mode
    • Database
    • AWS connection information

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Installation with Anaconda/Miniconda

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Updating SmartScope

By Jonathan Bouvette and Elizabeth Viverette
© Copyright 2022, NIEHS/NIH Molecular Microscopy Consortium and Bartesaghi Lab.